docs: update CLAUDE.md with persistent route catalog conventions

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

CLAUDE.md

@@ -38,7 +38,7 @@ java -jar cameleer-server-app/target/cameleer-server-app-1.0-SNAPSHOT.jar
 - Jackson `JavaTimeModule` for `Instant` deserialization
 - Communication: receives HTTP POST data from agents (executions, diagrams, metrics, logs), serves SSE event streams for config push/commands (config-update, deep-trace, replay, route-control)
 - Environment filtering: all data queries filter by the selected environment. All commands target only agents in the selected environment. Backend endpoints accept optional `environment` query parameter; null = all environments (backward compatible).
-- Maintains agent instance registry (in-memory) with states: LIVE -> STALE -> DEAD. Auto-heals from JWT `env` claim + heartbeat body on heartbeat/SSE after server restart (priority: heartbeat `environmentId` > JWT `env` claim > `"default"`). Capabilities and route states updated on every heartbeat (protocol v2). Route catalog falls back to ClickHouse stats for route discovery when registry has incomplete data.
+- Maintains agent instance registry (in-memory) with states: LIVE -> STALE -> DEAD. Auto-heals from JWT `env` claim + heartbeat body on heartbeat/SSE after server restart (priority: heartbeat `environmentId` > JWT `env` claim > `"default"`). Capabilities and route states updated on every heartbeat (protocol v2). Route catalog merges three sources: in-memory agent registry, persistent `route_catalog` table (ClickHouse), and `stats_1m_route` execution stats. The persistent catalog tracks `first_seen`/`last_seen` per route per environment, updated on every registration and heartbeat. Routes appear in the sidebar when their lifecycle overlaps the selected time window (`first_seen <= to AND last_seen >= from`), so historical routes remain visible even after being dropped from newer app versions.
 - Multi-tenancy: each server instance serves one tenant (configured via `CAMELEER_SERVER_TENANT_ID`, default: `"default"`). Environments (dev/staging/prod) are first-class. PostgreSQL isolated via schema-per-tenant (`?currentSchema=tenant_{id}`) and `ApplicationName=tenant_{id}` on the JDBC URL. ClickHouse shared DB with `tenant_id` + `environment` columns, partitioned by `(tenant_id, toYYYYMM(timestamp))`.
 - Storage: PostgreSQL for RBAC, config, and audit; ClickHouse for all observability data (executions, search, logs, metrics, stats, diagrams). ClickHouse schema migrations in `clickhouse/*.sql`, run idempotently on startup by `ClickHouseSchemaInitializer`. Use `IF NOT EXISTS` for CREATE and ADD PROJECTION.
 - Log exchange correlation: `ClickHouseLogStore` extracts `exchange_id` from log entry MDC, preferring `cameleer.exchangeId` over `camel.exchangeId` (fallback for older agents). For `ON_COMPLETION` exchange copies, the agent sets `cameleer.exchangeId` to the parent's exchange ID via `CORRELATION_ID`.
@@ -74,3 +74,105 @@ When adding, removing, or renaming classes, controllers, endpoints, UI component
 ## Disabled Skills
 
 - Do NOT use any `gsd:*` skills in this project. This includes all `/gsd:` prefixed commands.
+
+<!-- gitnexus:start -->
+# GitNexus — Code Intelligence
+
+This project is indexed by GitNexus as **cameleer-server** (6281 symbols, 15871 relationships, 300 execution flows). Use the GitNexus MCP tools to understand code, assess impact, and navigate safely.
+
+> If any GitNexus tool warns the index is stale, run `npx gitnexus analyze` in terminal first.
+
+## Always Do
+
+- **MUST run impact analysis before editing any symbol.** Before modifying a function, class, or method, run `gitnexus_impact({target: "symbolName", direction: "upstream"})` and report the blast radius (direct callers, affected processes, risk level) to the user.
+- **MUST run `gitnexus_detect_changes()` before committing** to verify your changes only affect expected symbols and execution flows.
+- **MUST warn the user** if impact analysis returns HIGH or CRITICAL risk before proceeding with edits.
+- When exploring unfamiliar code, use `gitnexus_query({query: "concept"})` to find execution flows instead of grepping. It returns process-grouped results ranked by relevance.
+- When you need full context on a specific symbol — callers, callees, which execution flows it participates in — use `gitnexus_context({name: "symbolName"})`.
+
+## When Debugging
+
+1. `gitnexus_query({query: "<error or symptom>"})` — find execution flows related to the issue
+2. `gitnexus_context({name: "<suspect function>"})` — see all callers, callees, and process participation
+3. `READ gitnexus://repo/cameleer-server/process/{processName}` — trace the full execution flow step by step
+4. For regressions: `gitnexus_detect_changes({scope: "compare", base_ref: "main"})` — see what your branch changed
+
+## When Refactoring
+
+- **Renaming**: MUST use `gitnexus_rename({symbol_name: "old", new_name: "new", dry_run: true})` first. Review the preview — graph edits are safe, text_search edits need manual review. Then run with `dry_run: false`.
+- **Extracting/Splitting**: MUST run `gitnexus_context({name: "target"})` to see all incoming/outgoing refs, then `gitnexus_impact({target: "target", direction: "upstream"})` to find all external callers before moving code.
+- After any refactor: run `gitnexus_detect_changes({scope: "all"})` to verify only expected files changed.
+
+## Never Do
+
+- NEVER edit a function, class, or method without first running `gitnexus_impact` on it.
+- NEVER ignore HIGH or CRITICAL risk warnings from impact analysis.
+- NEVER rename symbols with find-and-replace — use `gitnexus_rename` which understands the call graph.
+- NEVER commit changes without running `gitnexus_detect_changes()` to check affected scope.
+
+## Tools Quick Reference
+
+| Tool | When to use | Command |
+|------|-------------|---------|
+| `query` | Find code by concept | `gitnexus_query({query: "auth validation"})` |
+| `context` | 360-degree view of one symbol | `gitnexus_context({name: "validateUser"})` |
+| `impact` | Blast radius before editing | `gitnexus_impact({target: "X", direction: "upstream"})` |
+| `detect_changes` | Pre-commit scope check | `gitnexus_detect_changes({scope: "staged"})` |
+| `rename` | Safe multi-file rename | `gitnexus_rename({symbol_name: "old", new_name: "new", dry_run: true})` |
+| `cypher` | Custom graph queries | `gitnexus_cypher({query: "MATCH ..."})` |
+
+## Impact Risk Levels
+
+| Depth | Meaning | Action |
+|-------|---------|--------|
+| d=1 | WILL BREAK — direct callers/importers | MUST update these |
+| d=2 | LIKELY AFFECTED — indirect deps | Should test |
+| d=3 | MAY NEED TESTING — transitive | Test if critical path |
+
+## Resources
+
+| Resource | Use for |
+|----------|---------|
+| `gitnexus://repo/cameleer-server/context` | Codebase overview, check index freshness |
+| `gitnexus://repo/cameleer-server/clusters` | All functional areas |
+| `gitnexus://repo/cameleer-server/processes` | All execution flows |
+| `gitnexus://repo/cameleer-server/process/{name}` | Step-by-step execution trace |
+
+## Self-Check Before Finishing
+
+Before completing any code modification task, verify:
+1. `gitnexus_impact` was run for all modified symbols
+2. No HIGH/CRITICAL risk warnings were ignored
+3. `gitnexus_detect_changes()` confirms changes match expected scope
+4. All d=1 (WILL BREAK) dependents were updated
+
+## Keeping the Index Fresh
+
+After committing code changes, the GitNexus index becomes stale. Re-run analyze to update it:
+
+```bash
+npx gitnexus analyze
+```
+
+If the index previously included embeddings, preserve them by adding `--embeddings`:
+
+```bash
+npx gitnexus analyze --embeddings
+```
+
+To check whether embeddings exist, inspect `.gitnexus/meta.json` — the `stats.embeddings` field shows the count (0 means no embeddings). **Running analyze without `--embeddings` will delete any previously generated embeddings.**
+
+> Claude Code users: A PostToolUse hook handles this automatically after `git commit` and `git merge`.
+
+## CLI
+
+| Task | Read this skill file |
+|------|---------------------|
+| Understand architecture / "How does X work?" | `.claude/skills/gitnexus/gitnexus-exploring/SKILL.md` |
+| Blast radius / "What breaks if I change X?" | `.claude/skills/gitnexus/gitnexus-impact-analysis/SKILL.md` |
+| Trace bugs / "Why is X failing?" | `.claude/skills/gitnexus/gitnexus-debugging/SKILL.md` |
+| Rename / extract / split / refactor | `.claude/skills/gitnexus/gitnexus-refactoring/SKILL.md` |
+| Tools, resources, schema reference | `.claude/skills/gitnexus/gitnexus-guide/SKILL.md` |
+| Index, status, clean, wiki CLI commands | `.claude/skills/gitnexus/gitnexus-cli/SKILL.md` |
+
+<!-- gitnexus:end -->